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成簇的规律间隔短回文重复序列/Cas9系统在病毒领域的应用

郑庆芬 段钟平 李建生

引用本文:
Citation:

成簇的规律间隔短回文重复序列/Cas9系统在病毒领域的应用

DOI: 10.3969/j.issn.1001-5256.2016.01.041
基金项目: 

科研基地建设-重大传染病防治协同创新中心(2011协同创新中心)(115215); “艾滋病和病毒性肝炎等重大传染病防治”科技重大专项基金资助项目(2013ZX10002002-006); 北京市科学技术委员会资助临床特色项目(Z131107002213019;Z151100004015066); 

详细信息
  • 中图分类号: R373

Application of CRISPR/Cas9 system in virus research

Research funding: 

 

  • 摘要: 目前成簇的规律间隔的短回文重复序列(CRISPR)/Cas9系统已经在很多物种及细胞中被广泛用来编辑基因组DNA,这一系统是第三代人工核酸内切酶,通过识别短的病毒序列来完成基因的编辑。介绍了该系统的结构特点以及在病毒领域的应用,包括病毒相关基因的功能研究,以及抗病毒治疗(包括HIV、HBV、EB病毒等)方面的研究,同时也对该系统未来在病毒方面的研究方向进行展望。

     

  • [1] BIBIKOVA M,BEUMER K,TRAUTMAN JK,et al.Enhancing gene targeting with designed zinc finger nucleases[J].Science,2003,300(5620):764-764.
    [2] BIBIKOVA M,GOLIC M,GOLIC KG,et al.Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases[J].Genetics,2002,161(3):1169-1175.
    [3]IRION U,KRAUSS J,NSSLEIN-VOLHARD C.Precise and efficient genome editing in zebrafish using the CRISPR/Cas9 system[J].Development,2014,141(24):4827-4830.
    [4]RYAN OW,CATE JH.Multiplex engineering of industrial yeast genomes using CRISPRm[J].Methods Enzymol,2014,546:473-489.
    [5]QIN W,DION SL,KUTNY PM,et al.Efficient CRISPR/Cas9-mediated genome editing in mice by zygote electroporation of nuclease[J].Genetics,2015,200(2):423-430.
    [6]JIANG W,ZHOU H,BI H,et al.Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis,tobacco,sorghum and rice[J].Nucleic Acids Res,2013,41(20):e188.
    [7]GRISSA I,VERGNAUD G,POURCEL C.The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats[J].BMC Bioinformatics,2007,8:172.
    [8]GARNEAU JE,DUOUIS ME,VILLION M,et al.The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA[J].Nature,2010,468(7320):67-71.
    [9]DELTCHEVA E,CHYLINSKI K,SHARMA CM,et al.CRISPR RNA maturation by trans-encoded small RNA and host factor RNaseⅢ[J].Nature,2011,471(7340):602-607.
    [10] CONG L,RAN FA,COX D,et al.Multiplex genome engineering using CRISPR/Cas systems[J].Science,2013,339(6121):819-823.
    [11]SUENAGE T,KOHYAMA M,HIRAYASU K,et al.Engineering large viral DNA genomes using the CRISPR-Cas9 system[J].Microbiol Immunol,2014,58(9):513-522.
    [12]JOHNSON KE,BOTTERO V,FLAHERTY S,et al.IFI16 restricts HSV-1 replication by accumulating on the hsv-1 genome,repressing HSV-1 gene expression,and directly or indirectly modulating histone modifications[J].PLo S Pathog,2014,10(11):e1004503.
    [13]BI Y,SUN L,GAO D,et al.High-efficiency targeted editing of large viral genomes by RNA-guided nucleases[J].PLo S Pathog,2014,10(5):e1004090.
    [14]ROBLES-SIKISAKA R,LY M,BOEHM T,et al.Association between living environment and human oral viral ecology[J].ISME J,2013,7(9):1710-1724.
    [15]GU WG,CHEN XQ.Targeting CCR5 for anti-HIV research[J].Eur J Clin Microbiol Infect Dis,2014,33(11):1881-1887.
    [16]HU W,KAMINSKI R,YANG F,et al.RNA-directed gene editing specifically eradicates latent and prevents new HIV-1 infection[J].Proce Nati Acad Sci U S A,2014,111(31):11461-11466.
    [17]SCHIFFER JT,SWAN DA,STONE D,et al.Predictors of hepatitis B cure using gene therapy to deliver DNA cleavage enzymes:a mathematical modeling approach[J].PLo S Comput Biol,2013,9(7):e1003131.
    [18]LIN SR,YANG HC,KUO YT,et al.The CRISPR/Cas9 system facilitates clearance of the intrahepatic HBV templates in vivo[J].Mol Ther Nucleic Acids,2014,3:e186.
    [19]DONG C,QU L,WANG H,et al.Targeting hepatitis B virus ccc DNA by CRISPR/Cas9 nuclease efficiently inhibits viral replication[J].Antiviral Res,2015,118:110-117.
    [20]SEEGER C,SOHN JA.Targeting hepatitis B virus with CRISPR/Cas9[J].Mol Ther Nucleic Acids,2014,3(12):e216.
    [21]ZHEN S,HUA L,LIU YH,et al.Harnessing the clustered regularly interspaced short palindromic repeat(CRISPR)/CRISPR-associated Cas9 system to disrupt the hepatitis B virus[J].Gene Ther,2015,22(5):402-412.
    [22]KENNEDY EM,BASSIT LC,MUELLER H,et al.Suppression of hepatitis B virus DNA accumulation in chronically infected cells using a bacterial CRISPR/Cas RNA-guided DNA endonuclease[J].Virology,2015,476:196-205.
    [23]VOCKERODT M,YAP LF,SHANNON-LOWE C,et al.The Epstein-Barr virus and the pathogenesis of lymphoma[J].J Pathol,2015,235(2):312-322.
    [24]WANG J,QUAKE SR.RNA-guided endonuclease provides a therapeutic strategy to cure latent herpesviridae infection[J].Proc Natl Acad Sci U S A,2014,111(36):13157-13162.
    [25]CHO SW,KIM S,KIM Y,et al.Analysis of off-target effects of CRISPR/Cas-derived RNA-guided endonucleases and nickases[J].Genome Res,2014,24(1):132-141.
    [26]GHEZRAOUI H,PIGANEAU M,RENOUF B,et al.Chromosomal translocations in human cells are generated by canonical nonhomologous end-joining[J].Mol Cell,2014,55(6):829-842.
    [27]TSAI SQ,WYVEKENS N,KHAYTER C,et al.Dimeric CRISPR RNA-guided Fokl nucleases for highly specific genome editing[J].Nat Biotechnol,2014,32(6):569-576.
    [28]RAMAKRISHNA S,KWAKU DAD AB,BELOOR J,et al.Gene disruption by cell-penetrating peptide-mediated delivery of Cas9 protein and guide RNA[J].Genome Res,2014,24(6):1020-1027.
    [29]KOTTERMAN MA,SCHAFFER DV.Engineering adeno-associated viruses for clinical gene therapy[J].Nat Rev Genet,2014,15(7):445-451.
    [30]KIM S,KIM D,CHO SW,et al.Highly efficient RNA-guided genome editing in human cells via delivery of purified Cas9 ribonucleoproteins[J].Genome Res,2014,24(6):1012-1019.
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出版历程
  • 收稿日期:  2015-05-07
  • 出版日期:  2016-01-20
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